Skip to content

Add manifest to nextflow.config #186

Description

@cimendes

It came to my attention that we do not include the manifest in the nextflow config file generated by flowcraft. It would be important to start including this with information about the pipeline generated, in particular what is the main script.
As an example:

flowcraft build -r denim -o denim

would generate the following manifest

manifest {
  mainScript = 'denim.nf'
  nextflowVersion = '>=0.32.0'
}

This would allow for the pipeline to be executed simply as nextflow run

For recipes other fields could be included, such as name, description, author, version and homepage, if applicable.

Activity

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Metadata

Metadata

Assignees

Labels

enhancementNew feature or request

Type

No type

Projects

No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions