Unable to initialize environment because of error: unable to read qmaster name: qmaster hostname in "/var/lib/gridengine/default/common/act_qmaster" ha Exiting.

[yhsYhsYhs]

Hello，
When I run ectools “for i in {0001..0017}; do cd $i; qsub -cwd -j y -t 1:500 ../correct.sh; cd ..; done
”, I encountered some problems :
Unable to initialize environment because of error: unable to read qmaster name: qmaster hostname in "/var/lib/gridengine/default/common/act_qmaster" ha
Exiting.
Could you give me some advice of this question?

[yhsYhsYhs]

syb@thinkstation:~/software/organism_correct$ for i in {0001..0017}; do cd $i; qsub -cwd -j y -t 1:${500} ../correct.sh; cd ..; done
qsub: illegal -c value ""
usage: qsub [-a date_time] [-A account_string] [-b secs]
[-c [ none | { enabled | periodic | shutdown |
depth= | dir= | interval=}... ]
[-C directive_prefix] [-d path] [-D path]
[-e path] [-h] [-I] [-j oe] [-k {oe}] [-l resource_list] [-m n|{abe}]
[-M user_list] [-N jobname] [-o path] [-p priority] [-P proxy_user] [-q queue]
[-r y|n] [-S path] [-t number_to_submit] [-T type] [-u user_list] [-w] path

[vimaldenehar]

Any idea why this happening

[jgurtowski]

Looks like the qsub command doesn't have -cwd (current working directory) flag anymore.

[vimaldenehar]

oh ok, please let me know how we can fix this.