Merged latest fedrann to main - #13

Merged

CJ-Miao merged 10 commits into

mainfrom

Jan 26, 2026

Commits on Dec 11, 2025

Merge pull request #4 from jzhang-dev/main
CJ-Miao
authored
09187cf
Multi-threads process feature matrix
CJ-Miao
committed
ab699e5

Commits on Dec 12, 2025

fix kmer_searcher; fix multi-threads feature matrix generation
CJ-Miao
committed
8f03971

Commits on Dec 15, 2025

v0.5.2: finish reconstruction
CJ-Miao
committed
794f8c9

Commits on Dec 16, 2025

Optimize kmer searcher
CJ-Miao
committed
1103089

Commits on Dec 18, 2025

v5.0.2 use jellyfish count kmer
CJ-Miao
committed
aae4f41

Commits on Jan 22, 2026

v0.5.3 fix mprof; disable nndescent threads and fix kmer_counter_function
CJ-Miao
committed
7d7b31e

Commits on Jan 26, 2026

Merge branch 'mcj' into merged_mcj
CJ-Miao
authored
fe480e5
Refactor global variable references in __main__.py
CJ-Miao
authored
9e7944f
Refactor global variable references in count_kmers.py
CJ-Miao
authored
b6ef7f4