chore(release): v0.8.0 by liblaf-release-please[bot] · Pull Request #104 · liblaf/apple

liblaf-release-please · 2026-05-18T13:20:02Z

v0.8.0 - 2026-10-02

💥 BREAKING CHANGES

Refactored warp elastic energy module structure - e2fffdc by @liblaf
remove the previous model, inverse, optim, scene, utils, consts, jax.model, and warp.energies APIs; use the new forward, collision, common, and warp.fem modules instead - e52b195 by @liblaf
remove the liblaf.apple.jax package and JAX-based forward/collision APIs in favor of Torch tensors and Warp material adapters. - 67dbecb by @liblaf

✨ Features

(apple) improve inverse simulation with coarse-to-fine transfer and enhanced solvers - 61d530e by @liblaf
(apple) implement hybrid JAX/Warp model framework and WarpPhaceV2 - 6d1ae34 by @liblaf
(apple) add SMAS support and volume fraction for elastic energies - 79a6c2d by @liblaf
(exp) update inverse-toy simulation and add Newton solver - cee4852 by @liblaf
(exp) add SMAS forward simulation experiments - 90f086c by @liblaf
(exp) add inverse activation experiments for face and toy cases - abaf2e3 by @liblaf
(exp) compare belly losses on unreachable targets - a538dd3 by @liblaf
(exp) diagnose unreachable-target inverse bumpiness - 93b0953 by @liblaf
(exp) add saved-state material visualizations and reports - d56fa1b by @liblaf
(exp) publish reviewed September research sources - 86118a7 by @liblaf
(exp) preserve historical sources and public result records - e156589 by @liblaf
(experiment) validate fat attenuation of bumpy activation - 77721e8 by @liblaf
(inverse) enhance inverse solver with constraint support and improved adjoint solver - 892dbfd by @liblaf
(smas) add stable neo-hookean simulation experiments - 5d1ae88 by @liblaf
(warp) add Koiter shell potential - ae2f318 by @liblaf
add inverse toy experiments for forward simulation and muscle activation - 00ba035 by @liblaf
[breaking] refactor elastic energies and add inverse physics module - e2fffdc by @liblaf
add Neo-Hookean Warp energies and line-search PNCG - 88a29ef by @liblaf
add staged PNCG continuation for forward solves - c5f5267 by @liblaf
[breaking] add Torch differentiable inverse simulations - 67dbecb by @liblaf
expand simulation solvers and CUDA support - 443b2b6 by @liblaf

🐛 Bug Fixes

(inverse-face) split muscle and SMAS material fractions - 51e6274 by @liblaf
(warp) correct ARAP muscle energy implementation and kernel function names - d734e9b by @liblaf
align activation shear component ordering - a353c93 by @liblaf

📝 Documentation

(exp) report inverse-face 3152k success - d9c8f51 by @liblaf
(exp) report inverse-face continued optimization - 28f3d6e by @liblaf
(exp) summarize Expression000 surface prestrain - b4a0ad8 by @liblaf
(exp) summarize 4pct Expression000 surface prestrain - 5a56643 by @liblaf
(exp) summarize 10pct metric surface prestrain - ea57258 by @liblaf
(exp) summarize volume area diagnostics - 8b2efe1 by @liblaf
(exp) report fat-thickness bumpiness findings - 4c28bae by @liblaf
(exp) report Smile material screen physical validity - fef1e0f by @liblaf
(exp) record static material admissibility result - f9656bf by @liblaf
(exp) record static material A2 boundary result - 837bbb3 by @liblaf
(smas) update inverse-unreachable clipped figures - 205ab2a by @liblaf

🎨 Styles

collapse multi-line return expressions to single line - acf52bc by @liblaf

♻️ Code Refactoring

[breaking] replace model stack with forward simulation API - e52b195 by @liblaf

❤️ Contributors

@liblaf

liblaf-mega-linter · 2026-05-18T13:21:17Z

✅⚠️MegaLinter analysis: Success with warnings

Descriptor	Linter	Files	Fixed	Errors	Warnings	Elapsed time
✅ BASH	shellcheck	2		0	0	0.06s
✅ BASH	shfmt	2	0	0	0	0.65s
⚠️ COPYPASTE	jscpd	yes		4047	no	22.29s
✅ JSON	jsonlint	57		0	0	0.43s
✅ JSON	prettier	57	19	0	0	3.55s
✅ JSON	v8r	57		0	0	12.29s
⚠️ MARKDOWN	rumdl	477	9	1	0	1.8s
⚠️ PYTHON	ruff	yes	yes	1324	no	7.88s
✅ PYTHON	ruff-format	yes	yes	no	no	1.13s
✅ REPOSITORY	git_diff	yes		no	no	1.92s
⚠️ SPELL	cspell	1867		6594	0	140.76s

Detailed Issues

⚠️ SPELL / cspell - 6594 errors

wing .cspell.json file at the root of your repository
Of course, please correct real typos before :)

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You can also copy-paste megalinter-reports/LINTER_DEFAULT at the root of your repository

(Truncated to last 10000 characters out of 1331993)

⚠️ COPYPASTE / jscpd - 4047 errors

09/30/stage3-mouthopen-smile-contact-comparison/src/20-run-stage3-transition.py [623:48 - 637:14] (15 lines, 75 tokens)
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 - tests/experiments/test_fit_l2_unrestricted.py [6:1 - 19:5] (14 lines, 61 tokens)
   tests/experiments/test_stress_acceptance.py [7:1 - 20:5]
Clone found (python)
 - tests/experiments/test_stress_runtime.py [313:54 - 348:6] (36 lines, 113 tokens)
   tests/forward/test_static_simulation.py [13:67 - 48:6]
Clone found (python)
 - tests/solvers/test_cupy.py [45:5 - 51:4] (7 lines, 63 tokens)
   tests/solvers/test_cupy.py [62:5 - 66:10]
Clone found (python)
 - tests/warp/test_fiber_spring.py [9:1 - 40:37] (32 lines, 253 tokens)
   tests/warp/test_koiter.py [88:1 - 118:48]
Clone found (python)
 - tests/warp/test_fiber_spring.py [11:62 - 19:26] (9 lines, 60 tokens)
   tests/warp/test_stable_neo_hookean_active.py [54:82 - 62:26]
Clone found (python)
 - tests/warp/test_fiber_spring.py [19:30 - 55:25] (37 lines, 223 tokens)
   tests/warp/test_stable_neo_hookean_active.py [62:27 - 92:26]
Clone found (python)
 - tests/warp/test_fiber_spring.py [247:21 - 252:32] (6 lines, 63 tokens)
   tests/warp/test_stable_neo_hookean_active.py [356:20 - 361:32]
Clone found (python)
 - tests/warp/test_fiber_spring.py [279:5 - 286:6] (8 lines, 74 tokens)
   tests/warp/test_fiber_spring.py [308:5 - 315:6]
Clone found (python)
 - tests/warp/test_koiter.py [325:56 - 333:52] (9 lines, 58 tokens)
   tests/warp/test_koiter.py [397:57 - 405:52]
Clone found (python)
 - tests/warp/test_koiter.py [333:74 - 342:6] (10 lines, 54 tokens)
   tests/warp/test_koiter.py [378:71 - 387:10]
Clone found (python)
 - tests/warp/test_koiter.py [333:74 - 342:6] (10 lines, 54 tokens)
   tests/warp/test_koiter.py [405:86 - 414:6]
Clone found (python)
 - tests/warp/test_koiter.py [333:74 - 342:6] (10 lines, 54 tokens)
   tests/warp/test_koiter.py [439:63 - 449:6]
Clone found (python)
 - tests/warp/test_koiter.py [343:7 - 351:6] (9 lines, 51 tokens)
   tests/warp/test_koiter.py [470:15 - 478:6]
Clone found (python)
 - tests/warp/test_koiter.py [350:28 - 355:76] (6 lines, 62 tokens)
   tests/warp/test_koiter.py [422:41 - 426:76]
Clone found (python)
 - tests/warp/test_koiter.py [405:11 - 421:11] (17 lines, 130 tokens)
   tests/warp/test_koiter.py [508:15 - 528:6]
Clone found (python)
 - tests/warp/test_stable_neo_hookean_active.py [167:26 - 176:6] (10 lines, 52 tokens)
   tests/warp/test_stable_neo_hookean_active.py [296:49 - 305:6]
Clone found (python)
 - tests/warp/test_stable_neo_hookean_active.py [167:26 - 176:6] (10 lines, 52 tokens)
   tests/warp/test_stable_neo_hookean_active.py [322:5 - 331:6]
┌────────────┬────────────────┬─────────────┬──────────────┬──────────────┬──────────────────┬───────────────────┐
│ Format     │ Files analyzed │ Total lines │ Total tokens │ Clones found │ Duplicated lines │ Duplicated tokens │
├────────────┼────────────────┼─────────────┼──────────────┼──────────────┼──────────────────┼───────────────────┤
│ bash       │ 1              │ 38          │ 74           │ 0            │ 0 (0.00%)        │ 0 (0.00%)         │
├────────────┼────────────────┼─────────────┼──────────────┼──────────────┼──────────────────┼───────────────────┤
│ css        │ 2              │ 186         │ 2316         │ 2            │ 104 (55.91%)     │ 1242 (53.63%)     │
├────────────┼────────────────┼─────────────┼──────────────┼──────────────┼──────────────────┼───────────────────┤
│ javascript │ 4              │ 558         │ 4358         │ 2            │ 277 (49.64%)     │ 2179 (50.00%)     │
├────────────┼────────────────┼─────────────┼──────────────┼──────────────┼──────────────────┼───────────────────┤
│ python     │ 1256           │ 475001      │ 3188532      │ 4043         │ 115215 (24.26%)  │ 811061 (25.44%)   │
├────────────┼────────────────┼─────────────┼──────────────┼──────────────┼──────────────────┼───────────────────┤
│ toml       │ 5              │ 619         │ 2473         │ 0            │ 0 (0.00%)        │ 0 (0.00%)         │
├────────────┼────────────────┼─────────────┼──────────────┼──────────────┼──────────────────┼───────────────────┤
│ Total:     │ 1268           │ 476402      │ 3197753      │ 4047         │ 115596 (24.26%)  │ 814482 (25.47%)   │
└────────────┴────────────────┴─────────────┴──────────────┴──────────────┴──────────────────┴───────────────────┘
Found 4047 clones.
HTML report saved to megalinter-reports/copy-paste/jscpd-report.html
ERROR: jscpd found too many duplicates (24.3%) over threshold (0.0%)
time: 12.03s

(Truncated to last 10000 characters out of 915099)

⚠️ PYTHON / ruff - 1324 errors

otice at top of file
--> src/liblaf/apple/solvers/optim/base/_optimizer.py:1:1

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--> src/liblaf/apple/warp/fem/func/__init__.py:1:1

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--> src/liblaf/apple/warp/fem/func/_hess_diag.py:1:1

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--> src/liblaf/apple/warp/fem/func/_hess_prod.py:1:1

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--> src/liblaf/apple/warp/fem/func/_hess_quad.py:1:1

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--> src/liblaf/apple/warp/fem/func/_misc.py:1:1

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--> src/liblaf/apple/warp/potential/_ext_force.py:1:1

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--> tests/common/test_moduli.py:1:1

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--> tests/experiments/test_joint_isfixed_boundary.py:1:1

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--> tests/experiments/test_mouthopen_block_optimizer.py:1:1

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--> tests/experiments/test_mouthopen_convergence.py:1:1

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--> tests/experiments/test_stress_activation.py:1:1

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--> tests/inverse/test_diff_forward.py:1:1

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--> tests/solvers/test_cupy.py:1:1

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--> tests/solvers/test_pncg.py:1:1

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--> tests/warp/test_fiber_spring.py:1:1

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--> tests/warp/test_koiter.py:1:1

Found 1324 errors.
No fixes available (61 hidden fixes can be enabled with the `--unsafe-fixes` option).

(Truncated to last 10000 characters out of 210335)

⚠️ MARKDOWN / rumdl - 1 error

cs/203-collision-on-expression-pair-final.md:52:19: [MD057] Relative link '../data/remote-smile-recovery-006/inverse-smile-coupled-006/summary.json' does not exist
exp/2026/09/23/new-neutral/docs/203-collision-on-expression-pair-final.md:52:105: [MD057] Relative link '../data/remote-smile-recovery-006/inverse-smile-coupled-006/protocol.json' does not exist
exp/2026/09/23/new-neutral/docs/203-collision-on-expression-pair-final.md:52:196: [MD057] Relative link '../data/remote-smile-recovery-006/inverse-smile-coupled-006/endpoint.npz' does not exist
exp/2026/09/23/new-neutral/docs/203-collision-on-expression-pair-final.md:53:32: [MD057] Relative link '../data/remote-smile-recovery-006/inverse-smile-coupled-006/independent-audit.json' does not exist
exp/2026/09/23/new-neutral/docs/203-collision-on-expression-pair-final.md:53:150: [MD057] Relative link '../data/remote-smile-recovery-006/remote-smile-control-006/job.json' does not exist
exp/2026/09/23/new-neutral/docs/203-collision-on-expression-pair-final.md:54:24: [MD057] Relative link '../data/remote-smile-recovery-006/sync-manifest.json' does not exist
exp/2026/09/23/new-neutral/docs/203-collision-on-expression-pair-final.md:54:117: [MD057] Relative link '../data/recovery006-lineage-final.json' does not exist
exp/2026/09/23/new-neutral/docs/203-collision-on-expression-pair-final.md:55:51: [MD057] Relative link '../data/review-smile-coupled-006-final/' does not exist
exp/2026/09/23/new-neutral/docs/203-collision-on-expression-pair-final.md:55:129: [MD057] Relative link '../data/review-smile-coupled-006-final/target-vs-fit-front.png' does not exist
exp/2026/09/23/new-neutral/docs/203-collision-on-expression-pair-final.md:55:217: [MD057] Relative link '../data/review-smile-coupled-006-final/fit-error-force-curves.png' does not exist
exp/2026/09/23/new-neutral/docs/203-collision-on-expression-pair-final.md:55:312: [MD057] Relative link '../data/review-smile-coupled-006-final/objective-components-curves.png' does not exist
exp/2026/09/23/new-neutral/docs/203-collision-on-expression-pair-final.md:83:19: [MD057] Relative link '../data/inverse-mouthopen-coupled-018/summary.json' does not exist
exp/2026/09/23/new-neutral/docs/203-collision-on-expression-pair-final.md:83:83: [MD057] Relative link '../data/inverse-mouthopen-coupled-018/protocol.json' does not exist
exp/2026/09/23/new-neutral/docs/203-collision-on-expression-pair-final.md:83:148: [MD057] Relative link '../data/inverse-mouthopen-coupled-018/endpoint.npz' does not exist
exp/2026/09/23/new-neutral/docs/203-collision-on-expression-pair-final.md:83:225: [MD057] Relative link '../data/inverse-mouthopen-coupled-018/independent-audit.json' does not exist
exp/2026/09/23/new-neutral/docs/203-collision-on-expression-pair-final.md:84:29: [MD057] Relative link '../data/inverse-mouthopen-coupled-018/completion-verification.json' does not exist
exp/2026/09/23/new-neutral/docs/203-collision-on-expression-pair-final.md:84:138: [MD057] Relative link '../data/inverse-mouthopen-coupled-018/independent-final-cpu-verification.json' does not exist
exp/2026/09/23/new-neutral/docs/203-collision-on-expression-pair-final.md:85:55: [MD057] Relative link '../data/review-mouthopen-coupled-018-published/' does not exist
exp/2026/09/23/new-neutral/docs/203-collision-on-expression-pair-final.md:85:141: [MD057] Relative link '../data/review-mouthopen-coupled-018-published/target-vs-fit-front.png' does not exist
exp/2026/09/23/new-neutral/docs/203-collision-on-expression-pair-final.md:85:237: [MD057] Relative link '../data/review-mouthopen-coupled-018-published/fit-error-force-curves.png' does not exist
exp/2026/09/23/new-neutral/docs/203-collision-on-expression-pair-final.md:85:340: [MD057] Relative link '../data/review-mouthopen-coupled-018-published/objective-components-curves.png' does not exist
exp/2026/09/23/new-neutral/docs/71-force-curve.md:23:47: [MD057] Relative link '../data/review-repaired-reference-005/force/' does not exist
exp/2026/09/23/new-neutral/docs/71-force-curve.md:47:21: [MD057] Relative link '../data/http-verification-force-005.json' does not exist
exp/2026/09/23/new-neutral/docs/45-initial-force-audit.md:56:21: [MD057] Relative link '../data/initial-force-audit-001/force-components.json' does not exist
exp/2026/09/23/new-neutral/docs/30-active-strain-result.md:28:26: [MD057] Relative link '../data/forward-active-strain-001/active-strain-fields.npz' does not exist
exp/2026/09/23/new-neutral/docs/30-active-strain-result.md:44:19: [MD057] Relative link '../data/forward-active-strain-001/active-strain-mapping.json' does not exist
exp/2026/09/23/new-neutral/docs/30-active-strain-result.md:81:48: [MD057] Relative link '../data/forward-active-strain-001/active-strain-check.json' does not exist
exp/2026/09/23/new-neutral/docs/30-active-strain-result.md:85:38: [MD057] Relative link '../data/forward-active-strain-001/independent-audit.json' does not exist
exp/2026/09/23/new-neutral/docs/30-active-strain-result.md:87:44: [MD057] Relative link '../data/review-active-strain-001/index.html' does not exist
exp/2026/09/23/new-neutral/docs/30-active-strain-result.md:109:13: [MD057] Relative link '../data/forward-active-strain-001/summary.json' does not exist
exp/2026/09/23/new-neutral/docs/30-active-strain-result.md:110:14: [MD057] Relative link '../data/forward-active-strain-001/protocol.json' does not exist
exp/2026/09/23/new-neutral/docs/30-active-strain-result.md:111:11: [MD057] Relative link '../data/forward-active-strain-001/trace.jsonl' does not exist
exp/2026/09/23/new-neutral/docs/30-active-strain-result.md:112:12: [MD057] Relative link '../data/forward-active-strain-001/timing.json' does not exist
exp/2026/09/23/new-neutral/docs/30-active-strain-result.md:113:14: [MD057] Relative link '../data/forward-active-strain-001/endpoint.npz' does not exist
exp/2026/09/23/new-neutral/docs/30-active-strain-result.md:114:32: [MD057] Relative link '../data/forward-active-strain-001/active-strain-source-provenance.json' does not exist
exp/2026/09/23/new-neutral/docs/30-active-strain-result.md:115:28: [MD057] Relative link '../data/forward-active-strain-001/provenance.json' does not exist
exp/2026/09/23/new-neutral/docs/30-active-strain-result.md:116:19: [MD057] Relative link '../data/forward-active-strain-001/forward-only-guard.json' does not exist
exp/2026/09/23/new-neutral/docs/30-active-strain-result.md:117:19: [MD057] Relative link '../data/forward-active-strain-001/forward.log' does not exist
exp/2026/09/23/new-neutral/docs/30-active-strain-result.md:144:21: [MD057] Relative link '../data/http-verification-active-strain.json' does not exist
exp/2026/09/23/new-neutral/docs/30-active-strain-result.md:145:19: [MD057] Relative link '../data/serve-active-strain.json' does not exist
exp/2026/09/28/activation-smoothness-continuation/docs/20-results.md:9:1: [MD057] Relative link '../data/30-comparison/smoothness-comparison-preview.png' does not exist
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Fixed: Fixed 78/1765 issues in 9 files (901ms)

(Truncated to last 10000 characters out of 296670)

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liblaf-release-please Bot added automerge Merge the pull request once unit tests and other checks pass. release-please labels May 18, 2026

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chore(release): v0.8.0 - #104

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v0.8.0 - 2026-10-02

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