This repository contains documentation related to bioinformatics for the PEARG lab.
The documentation is hosted at pearg.github.io/pearg_documentation/.
Build the site with hugo or blogdown::build_site().
To deploy the site using GitHub pages on the gh-pages branch:
# Remove old public directory
rm -r public
# Prune old git worktrees
git worktree prune
# Add new worktree
git worktree add -B gh-pages public origin/gh-pages
# Build the site again in R
blogdown::build_site()
# Commit changes
cd public
git add --all
git commit -m "Publishing to gh-pages"
git push
Or follow the more detailed Hugo documentation.
Pages are stored in the content/ directory and are written in Markdown.
Create a pull request when you want to submit a change.